STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN87378.1Identified by sequence similarity; putative. (615 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein FliM; Identified by sequence similarity; putative.
    
   0.840
ENN85137.1
Putative riboflavin-specific deaminase; Identified by sequence similarity; putative.
   
    0.614
ENN87340.1
Hypothetical protein.
  
     0.585
ENN87703.1
Hypothetical protein.
  
     0.569
pabB
Putative para-aminobenzoate synthase; Identified by sequence similarity; putative.
  
    0.508
pcaB
3-carboxy-cis,cis-muconate cycloisomerase protein; Identified by sequence similarity; putative.
  
    0.508
purB
Adenylosuccinate lyase; Identified by sequence similarity; putative; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
    0.508
ENN87380.1
Hypothetical protein.
  
    0.505
ENN87381.1
Hypothetical protein.
       0.491
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
   
 0.486
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.