STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN86784.1Putative agmatinase; Identified by sequence similarity; putative; Belongs to the arginase family. (431 aa)    
Predicted Functional Partners:
ENN85244.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.821
hutI
Imidazolone-5-propionate hydrolase; Identified by sequence similarity; putative.
  
 
 0.787
argD
Acetylornithine aminotransferase 1; Identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 0.780
ENN84285.1
Pyridoxal kinase; Identified by sequence similarity; putative; Belongs to the pyridoxine kinase family.
   
 
  0.752
ENN89471.1
Hypothetical protein.
  
 
 0.727
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
 0.710
ENN85912.1
Proclavaminate amidinohydrolase; Identified by sequence similarity; putative; Belongs to the arginase family.
  
  
 
0.694
ENN84624.1
Hypothetical protein.
    
 0.692
gabT
Aminotransferase, class III; Identified by sequence similarity; putative.
 
 
  0.685
ENN88402.1
Ornithine cyclodeaminase; Identified by sequence similarity; putative.
 
  
 0.670
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.