Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN86080.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
ENN86081.1
Hypothetical protein.
       0.559
ENN86082.1
Hypothetical protein.
       0.559
ENN86083.1
Hypothetical protein.
       0.559
ENN86084.1
Hypothetical protein.
       0.559
ENN86085.1
Hypothetical protein.
       0.559
ENN86086.1
Hypothetical protein.
       0.552
ENN86087.1
Hypothetical protein.
       0.552
ENN86088.1
Hypothetical protein.
       0.541
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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