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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88821.1Putative proline iminopeptidase; Identified by sequence similarity; putative. (433 aa)    
Predicted Functional Partners:
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
  
 0.990
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 0.969
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
  
 0.816
ENN88824.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
     0.790
ENN88820.1
Hypothetical protein.
       0.773
ENN88822.1
Putative peptide transport system permease protein; Identified by sequence similarity; putative.
       0.757
ENN88823.1
Dipeptide transport system permease protein DppC; Identified by sequence similarity; putative.
       0.757
trpE
Putative anthralinate synthase protein; Identified by sequence similarity; putative.
 
  
 0.727
ENN88577.1
Putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein; Identified by sequence similarity; putative.
    
 0.681
mutB
Methylmalonyl-CoA mutase large subunit; Identified by sequence similarity; putative.
     
 0.649
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.