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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88819.1Hypothetical protein. (562 aa)    
Predicted Functional Partners:
ENN88405.1
Hypothetical protein.
 
 
0.993
ENN88826.1
Proline racemase; Identified by sequence similarity; putative; Belongs to the proline racemase family.
 
 
 0.895
ENN86391.1
Hypothetical protein; Belongs to the proline racemase family.
 
 
 0.890
ENN86756.1
Proline racemase; Identified by sequence similarity; putative; Belongs to the proline racemase family.
 
 
 0.881
ENN88813.1
malate/L-lactate dehydrogenase; Identified by sequence similarity; putative; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.808
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.754
ENN89194.1
Isocitrate dehydrogenase NADP; Identified by sequence similarity; putative; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
 0.724
ENN89570.1
Putative mandelate racemase/muconate lactonizing enzyme; Identified by sequence similarity; putative; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
  0.683
ENN88816.1
Putative permease of ABC transporter; Identified by sequence similarity; putative.
 
     0.617
ENN84911.1
Malate dehydrogenase; Identified by sequence similarity; putative; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.605
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.