Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN88819.1Hypothetical protein. (562 aa)    
Predicted Functional Partners:
ENN88405.1
Hypothetical protein.
   
 0.979
ENN88826.1
Proline racemase; Identified by sequence similarity; putative; Belongs to the proline racemase family.
 
 
 0.899
ENN86391.1
Hypothetical protein; Belongs to the proline racemase family.
 
 
 0.894
ENN86756.1
Proline racemase; Identified by sequence similarity; putative; Belongs to the proline racemase family.
 
 
 0.886
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
     
 0.808
ENN88813.1
malate/L-lactate dehydrogenase; Identified by sequence similarity; putative; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.784
aceA
Isocitrate lyase; Identified by sequence similarity; putative.
     
  0.757
ENN85788.1
Isocitrate lyase; Identified by sequence similarity; putative.
     
  0.757
ENN89194.1
Isocitrate dehydrogenase NADP; Identified by sequence similarity; putative; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
     
  0.741
ENN83963.1
Citrate synthase protein; Identified by sequence similarity; putative; Belongs to the citrate synthase family.
     
  0.735
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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