STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88207.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
ENN88205.1
Hypothetical protein.
       0.807
ENN88206.1
Identified by sequence similarity; putative.
       0.796
ENN88204.1
Hypothetical protein.
       0.778
ENN88208.1
ABC transporter, amino acid-binding protein substrate-binding protein; Identified by sequence similarity; putative.
       0.608
livM
High-affinity branched-chain amino acid transport system permease; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.559
livH
High-affinity branched-chain amino acid transport system permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
       0.559
livF
Putative branched-chain amino acid transport ATP-binding protein; Identified by sequence similarity; putative.
       0.559
ENN88203.1
ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
       0.559
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.