Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN88725.1Major facilitator superfamily MFS 1; Identified by sequence similarity; putative. (436 aa)    
Predicted Functional Partners:
ENN88724.1
Putative transcriptional regulator protein, GntR family; Identified by sequence similarity; putative.
 
     0.821
ENN84758.1
Hypothetical protein.
  
  
  0.579
ENN88723.1
Major facilitator superfamily MFS 1; Identified by sequence similarity; putative.
    
  0.517
ENN85500.1
Putative transporter; Identified by sequence similarity; putative.
  
  
  0.466
ENN86233.1
Putative permease protein; Identified by sequence similarity; putative.
  
  
  0.432
ENN85519.1
Major facilitator superfamily MFS 1 transporter; Identified by sequence similarity; putative.
  
  
  0.430
ENN85249.1
Nitrite extrusion protein; Identified by sequence similarity; putative.
    
  0.415
ENN85091.1
Fosmidomycin antibiotic resistance permease protein; Identified by sequence similarity; putative.
    
  0.415
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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