Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN88744.1Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative. (262 aa)    
Predicted Functional Partners:
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 0.983
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
  
 0.888
ENN88743.1
Hypothetical protein.
 
 
   0.852
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
  
 0.820
ENN88742.1
Hypothetical protein.
 
  
  0.811
ENN88604.1
Short chai dehydrogenase/reductase SDR; Identified by sequence similarity; putative.
  
  
  0.810
rkpH
Short-chain dehydrogenase/reductase (SDR) RkpH; Identified by sequence similarity; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.796
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by sequence similarity; putative.
  
     0.748
ENN89752.1
Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative.
  
     0.741
ENN85832.1
Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.723
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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