STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN87664.1Putative transcriptional regulator protein, AraC family; Identified by sequence similarity; putative. (302 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.592
ENN86547.1
AraC family transcriptional regulator; Identified by sequence similarity; putative.
  
   0.557
ENN87665.1
Alcohol dehydrogenase (NADP+) protein; Identified by sequence similarity; putative.
       0.493
ENN85503.1
AraC family transcriptional regulator; Identified by sequence similarity; putative.
  
     0.471
ENN86249.1
Transcriptional regulator, AraC family; Identified by sequence similarity; putative.
  
     0.456
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
     
 0.456
ENN86855.1
Transcriptional regulator, AraC family; Identified by sequence similarity; putative.
  
     0.453
ENN86546.1
AraC family transcriptional regulator; Identified by sequence similarity; putative.
  
   0.449
ENN89729.1
Transcriptional regulator, AraC family operon transcriptional activator; Identified by sequence similarity; putative.
  
   0.447
ENN85575.1
Hypothetical protein.
  
   0.420
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.