Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
exsAABC transporter ATP-binding protein transmembrane protein; Identified by sequence similarity; putative. (620 aa)    
Predicted Functional Partners:
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 0.908
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
   
 0.868
ENN87934.1
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
     
  0.836
ENN86438.1
Type I secretion system ATPase; Identified by sequence similarity; putative.
   
  0.708
ENN87931.1
Hypothetical protein.
       0.693
ENN85204.1
FAD-binding protein 9 siderophore-interacting domain protein; Identified by sequence similarity; putative.
   
  0.667
ssuB
Putative aliphatic sulfonates transport ATP-binding protein component of ABC transporter; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
    
0.620
helO
ATP-dependent helicase protein; Identified by sequence similarity; putative.
    
  0.598
ENN89044.1
Hypothetical protein.
  
  0.597
ENN86298.1
Putative ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
  
 
0.556
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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