Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN87938.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
ENN87606.1
Hypothetical protein.
  
     0.742
ENN86290.1
Hypothetical protein.
  
     0.726
ENN86156.1
Hypothetical protein.
  
     0.715
ENN87285.1
Surface antigen msp4 family protein; Identified by sequence similarity; putative.
  
     0.705
ENN87392.1
Hypothetical protein.
  
     0.682
ENN87178.1
Hypothetical protein.
  
     0.672
ENN88878.1
Putative two-component sensor histidine kinase protein kinase PleC; Identified by sequence similarity; putative.
  
     0.662
ENN89212.1
Hypothetical protein.
  
     0.651
hemF
Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.
       0.637
ENN85862.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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