Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN87943.1MoxR family protein; Identified by sequence similarity; putative. (337 aa)    
Predicted Functional Partners:
ENN87944.1
Hypothetical protein.
  
 0.979
ENN87946.1
Hypothetical protein.
 
     0.912
ENN87945.1
Hypothetical protein.
 
     0.904
ENN84624.1
Hypothetical protein.
   
 
 0.768
ENN87942.1
Hypothetical protein.
 
     0.698
ENN87947.1
GCN5-related N-acetyltransferase; Identified by sequence similarity; putative.
       0.692
cobT
Cobalamin biosynthesis protein; Identified by sequence similarity; putative.
    
 0.646
papS
Putative poly(A) polymerase; Identified by sequence similarity; putative; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.640
ENN87941.1
Putative NUDIX/MutT family protein; Identified by sequence similarity; putative.
       0.640
ENN89359.1
Hypothetical protein.
  
 
   0.560
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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