STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gguBXylose ABC transporter, permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family. (402 aa)    
Predicted Functional Partners:
ENN88038.1
ATP-binding protein component of ABC transporter protein; Identified by sequence similarity; putative.
 
 0.985
ENN88039.1
Sugar ABC transporter, periplasmic sugar-binding protein; Identified by sequence similarity; putative.
 
 0.979
ENN87069.1
Hypothetical protein.
 
  
  0.890
ENN87070.1
Sugar ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
 
 
  0.841
ENN87072.1
Sugar ABC transporter permease protein; Identified by sequence similarity; putative; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.744
rbsB
Ribose ABC transporter, substrate-binding protein; Identified by sequence similarity; putative.
 
  
  0.664
ENN87474.1
Putative sugar ABC transporter, substrate-binding protein; Identified by sequence similarity; putative.
  
  
  0.659
ENN86823.1
Periplasmic binding protein/LacI transcriptional regulator; Identified by sequence similarity; putative.
  
  
  0.615
ENN85382.1
ABC transporter; Identified by sequence similarity; putative.
 
 
  0.605
ENN88036.1
Hypothetical protein.
     
 0.573
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.