STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN85298.1Putative ABC transporter permease protein; Identified by sequence similarity; putative. (310 aa)    
Predicted Functional Partners:
ENN85299.1
Putative sugar ABC transporter, substrate-binding protein; Identified by sequence similarity; putative.
 
  0.982
ENN85296.1
ABC transporter ATP-binding protein Y4oS; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
  0.944
ENN85297.1
ABC transporter permease protein; Identified by sequence similarity; putative.
 
0.935
ENN84393.1
Binding protein-protein-dependent transport system inner membrane component; Identified by sequence similarity; putative.
 
  0.897
ENN86744.1
Binding protein-protein-dependent transport system inner membrane component; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
 
  0.897
araQ
L-arabinose transport system permease protein AraQ; Identified by sequence similarity; putative.
 
  0.897
ENN84125.1
Putative ABC transporter permease protein; Identified by sequence similarity; putative.
 
  0.897
ENN86733.1
ABC transporter, permease protein YurM; Identified by sequence similarity; putative.
 
  0.896
ENN86751.1
ABC transporter permease protein; Identified by sequence similarity; putative.
 
  0.895
ENN84385.1
Putative transmembrane component of ABC transporter; Identified by sequence similarity; putative.
 
  0.894
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.