STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN85152.1Transcriptional regulator, GntR family with aminotransferase; Identified by sequence similarity; putative. (442 aa)    
Predicted Functional Partners:
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 
 0.788
ENN85151.1
Hypothetical protein.
 
     0.757
trpE
Putative anthralinate synthase protein; Identified by sequence similarity; putative.
   
 
 0.704
glnH
Glutamine-binding protein periplasmic protein precursor; Identified by sequence similarity; putative.
 
     0.694
lysC
Aspartokinase/aspartate kinase; Identified by sequence similarity; putative; Belongs to the aspartokinase family.
   
 
 0.650
tyrA
Chorismate mutase; Identified by sequence similarity; putative.
     
 0.569
ENN86981.1
Hypothetical protein.
   
  0.562
ENN85149.1
Polar amino acid ABC transporter, inner membrane subunit; Identified by sequence similarity; putative.
 
     0.549
ENN87657.1
Putative aminotransferase protein; Identified by sequence similarity; putative.
  
     0.549
ENN84285.1
Pyridoxal kinase; Identified by sequence similarity; putative; Belongs to the pyridoxine kinase family.
  
  
 0.541
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.