STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN85042.1Cyclic nucleotide-binding protein; Identified by sequence similarity; putative. (158 aa)    
Predicted Functional Partners:
ENN85041.1
Putative multidrug ABC transporter, ATP-binding protein and permease protein; Identified by sequence similarity; putative.
 
   0.973
rpoB
DNA-directed RNA polymerase protein, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.955
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.952
rpoZ
RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.951
cyaD
Putative adenylate/guanylate cyclase transmembrane protein; Identified by sequence similarity; putative.
 
 
 0.910
ENN85027.1
Putative adenylate cyclase; Identified by sequence similarity; putative.
 
 
 0.908
ENN85847.1
Putative adenylate/guanylate cyclase; Identified by sequence similarity; putative.
 
 
 0.895
ENN85032.1
Putative adenylyl cyclase; Identified by sequence similarity; putative.
  
 
  0.849
ENN89693.1
Adenylate/guanylate cyclase; Identified by sequence similarity; putative.
  
 
  0.848
cyaA
Adenylate cyclase; Identified by sequence similarity; putative.
  
 
  0.845
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.