Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN84960.1Binding protein-protein-dependent transport system inner membrane component protein; Identified by sequence similarity; putative. (299 aa)    
Predicted Functional Partners:
potA-3
Spermidine/putrescine ABC transporter ATPase subunit ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.978
ENN84932.1
Binding protein-protein-dependent transport system inner membrane component; Identified by sequence similarity; putative.
  0.976
ENN84959.1
Ornithine carbamoyltransferase; Identified by sequence similarity; putative.
 
0.973
ENN84464.1
Putative component of ABC transporter; Identified by sequence similarity; putative.
  0.963
ENN84962.1
Extracellular solute-binding protein family 1 substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.961
ENN84953.1
ABC transporter, permease protein; Identified by sequence similarity; putative.
 
  0.959
ENN87495.1
Putative transmembrane component of ABC transporter; Identified by sequence similarity; putative.
 
  0.953
potD
Spermidine/putrescine periplasmic transport protein; Identified by sequence similarity; putative.
 
 
  0.923
potF
Spermidine/putrescine ABC transporter; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
  0.922
ENN85467.1
Putative spermidine/putrescine ABC transporter, permease protein; Identified by sequence similarity; putative.
 
  0.918
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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