Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN89554.1Hypothetical protein. (1395 aa)    
Predicted Functional Partners:
ENN89553.1
Putative outer membrane protein, protective antigen; Identified by sequence similarity; putative.
 
 
 0.996
argD
Acetylornithine aminotransferase 1; Identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
    
  0.684
argB
Acetylglutamate kinase/NAG kinase/N-acetyl-L-glutamate; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
  0.655
ENN84338.1
Hypothetical protein.
 
     0.571
ENN84289.1
Hypothetical protein.
  
     0.549
holA
DNA polymerase III, delta subunit; Identified by sequence similarity; putative.
  
     0.525
ENN89598.1
Hypothetical protein.
  
     0.516
ENN89231.1
Putative ABC transporter, substrate-binding protein; Identified by sequence similarity; putative.
 
   
 0.496
ENN88255.1
Chemotaxis motility protein; Identified by sequence similarity; putative.
  
  
 0.462
ENN84315.1
Import inner membrane translocase subunit Tim44; Identified by sequence similarity; putative.
  
     0.453
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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