Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN89205.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
ENN89207.1
Hypothetical protein.
       0.638
ENN89206.1
Hypothetical protein.
       0.638
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
    
  0.626
dksA
DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.
       0.574
ENN87030.1
Enolase; Identified by sequence similarity; putative.
    
 0.568
pgk
Phosphoglycerate kinase; Identified by sequence similarity; putative; Belongs to the phosphoglycerate kinase family.
    
  0.526
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
  0.493
ENN89208.1
Hypothetical protein.
       0.484
gpmB
Phosphoglycerate mutase; Identified by sequence similarity; putative; Belongs to the phosphoglycerate mutase family.
    
  0.439
ENN89800.1
Phosphoglycerate mutase; Identified by sequence similarity; putative.
    
  0.439
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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