STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88604.1Short chai dehydrogenase/reductase SDR; Identified by sequence similarity; putative. (122 aa)    
Predicted Functional Partners:
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 0.964
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
  
 0.878
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
  
 0.807
ENN88744.1
Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative.
  
  
  0.770
ENN87551.1
Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative.
  
 
  0.733
gcvP
Glycine dehydrogenase decarboxylating; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.727
gltB
Glutamate synthase, large subunit; Identified by sequence similarity; putative.
     
 0.707
ENN84749.1
Identified by sequence similarity; putative.
  
     0.705
ENN85228.1
Short-chain dehydrogenase/reductase SDR; Identified by sequence similarity; putative.
  
     0.691
ENN86919.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by sequence similarity; putative.
  
     0.688
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.