Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENN84712.1Putative membrane protein; Identified by sequence similarity; putative. (370 aa)    
Predicted Functional Partners:
ENN84714.1
Putative ABC transporter ATP-binding protein; Identified by sequence similarity; putative.
 
  0.987
ENN84715.1
Secretion protein HlyD; Identified by sequence similarity; putative.
 
  
 0.952
ENN84713.1
Putative membrane protein; Identified by sequence similarity; putative.
 
  
 
0.887
ENN85258.1
Putative membrane protein; Identified by sequence similarity; putative.
 
  
 0.761
ENN86510.1
Putative permease component of ABC transporter; Identified by sequence similarity; putative.
  
     0.660
nodI
Nod factor ABC transporter ATP-binding protein NodI; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
 
 
  0.659
ENN89828.1
ABC transporter; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
 
 
 
  0.646
ENN86746.1
ABC transporter nucleotide binding protein/ATPase protein; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily.
   
 
  0.639
ENN85259.1
HlyD family secretion protein; Identified by sequence similarity; putative.
 
 
 
0.603
yadG
ABC transporter ATP-binding protein yadG; Identified by sequence similarity; putative.
 
 
  0.600
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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