STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN84694.1Putative amicyanin protein; Identified by sequence similarity; putative. (107 aa)    
Predicted Functional Partners:
ENN86845.1
Hypothetical protein.
   
   0.953
ENN84693.1
Hypothetical protein.
 
     0.950
ENN84695.1
Putative RNA polymerase sigma factor protein, ECF family Genetic Information Processing; Identified by sequence similarity; putative; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.827
ENN85849.1
Multicopper oxidase; Identified by sequence similarity; putative.
   
 0.796
ENN88605.1
Putative periplasmic oxidoreductase; Identified by sequence similarity; putative.
   
 0.796
ENN85495.1
Multicopper oxidase type 3; Identified by sequence similarity; putative.
   
 0.796
ENN85669.1
Protein tyrosine/serine phosphatase; Identified by sequence similarity; putative.
   
 
 0.721
ENN85944.1
NADH-quinone oxidoreductase chain M; Identified by sequence similarity; putative.
    
   0.638
nuoM
NADH-ubiquinone oxidoreductase protein, chain M; Identified by sequence similarity; putative.
    
   0.638
ENN89767.1
Diguanylate cyclase/phosphodiesterase; Identified by sequence similarity; putative.
    
  0.622
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.