Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENN84644.1Lipopolysaccharide biosynthesis; Identified by sequence similarity; putative. (1085 aa)    
Predicted Functional Partners:
ENN85888.1
Putative glucosylltransferase protein; Identified by sequence similarity; putative.
 
 
 0.931
ENN84645.1
Exopolysaccharide production protein; Identified by sequence similarity; putative.
 
  
 0.868
ENN84643.1
Glucosylltransferase; Identified by sequence similarity; putative.
 
    0.831
ENN84642.1
Sugar transferase; Identified by sequence similarity; putative.
 
 
 0.818
ENN85890.1
Polysaccharide export protein; Identified by sequence similarity; putative.
 
  
 0.773
exoF
Exopolysaccharide biosynthesis protein; Identified by sequence similarity; putative.
 
  
 0.707
noeJ
Mannose-1-phosphate guanylyltransferase (GDP) protein; Identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.699
exoY
Exopolysaccharide production protein; Identified by sequence similarity; putative.
 
 
 0.649
ENN87612.1
Sugar transferase; Identified by sequence similarity; putative.
 
 
 0.648
ENN84646.1
Glucosylltransferase; Identified by sequence similarity; putative.
 
    0.617
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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