Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENN84634.1 | ENN84636.1 | RHSP_69365 | RHSP_69353 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | Protein containing condensation; Identified by sequence similarity; putative. | 0.999 |
ENN84634.1 | ENN84637.1 | RHSP_69365 | RHSP_69346 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | Hypothetical protein. | 0.948 |
ENN84634.1 | ENN85778.1 | RHSP_69365 | RHSP_81608 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | Hypothetical protein. | 0.619 |
ENN84634.1 | ENN89364.1 | RHSP_69365 | RHSP_83375 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | Methylenetetrahydrofolate dehydrogenase; Identified by sequence similarity; putative. | 0.763 |
ENN84634.1 | metH | RHSP_69365 | RHSP_47557 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.752 |
ENN84634.1 | pheT | RHSP_69365 | RHSP_66897 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | phenylalanyl-tRNA synthetase protein, beta subunit; Identified by sequence similarity; putative; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.795 |
ENN84634.1 | rsmB | RHSP_69365 | RHSP_76350 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; Identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.421 |
ENN84634.1 | thyA | RHSP_69365 | RHSP_82601 | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | Thymidylate synthase protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.429 |
ENN84636.1 | ENN84634.1 | RHSP_69353 | RHSP_69365 | Protein containing condensation; Identified by sequence similarity; putative. | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | 0.999 |
ENN84636.1 | ENN84637.1 | RHSP_69353 | RHSP_69346 | Protein containing condensation; Identified by sequence similarity; putative. | Hypothetical protein. | 0.803 |
ENN84636.1 | ENN85778.1 | RHSP_69353 | RHSP_81608 | Protein containing condensation; Identified by sequence similarity; putative. | Hypothetical protein. | 0.403 |
ENN84636.1 | ENN89364.1 | RHSP_69353 | RHSP_83375 | Protein containing condensation; Identified by sequence similarity; putative. | Methylenetetrahydrofolate dehydrogenase; Identified by sequence similarity; putative. | 0.480 |
ENN84636.1 | metH | RHSP_69353 | RHSP_47557 | Protein containing condensation; Identified by sequence similarity; putative. | B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.640 |
ENN84637.1 | ENN84634.1 | RHSP_69346 | RHSP_69365 | Hypothetical protein. | Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name. | 0.948 |
ENN84637.1 | ENN84636.1 | RHSP_69346 | RHSP_69353 | Hypothetical protein. | Protein containing condensation; Identified by sequence similarity; putative. | 0.803 |
ENN84637.1 | ENN85778.1 | RHSP_69346 | RHSP_81608 | Hypothetical protein. | Hypothetical protein. | 0.863 |
ENN84637.1 | ENN89364.1 | RHSP_69346 | RHSP_83375 | Hypothetical protein. | Methylenetetrahydrofolate dehydrogenase; Identified by sequence similarity; putative. | 0.854 |
ENN84637.1 | metH | RHSP_69346 | RHSP_47557 | Hypothetical protein. | B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.724 |
ENN84637.1 | nusB | RHSP_69346 | RHSP_17788 | Hypothetical protein. | Transcription antitermination protein B Genetic Information Processing; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.882 |
ENN84637.1 | pheT | RHSP_69346 | RHSP_66897 | Hypothetical protein. | phenylalanyl-tRNA synthetase protein, beta subunit; Identified by sequence similarity; putative; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.738 |
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