STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN84023.1Putative acyl-CoA dehydrogenase; Identified by sequence similarity; putative. (598 aa)    
Predicted Functional Partners:
ENN84025.1
Putative fatty oxidation complex subunit; Identified by sequence similarity; putative.
 
 0.993
ENN87244.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase; Identified by sequence similarity; putative.
  
 0.959
ENN88582.1
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein; Identified by sequence similarity; putative.
  
 0.959
paaJ
beta-ketoadipyl-CoA thiolase; Identified by sequence similarity; putative; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.941
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 
 0.884
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
  
 0.879
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
  
 0.864
ENN88531.1
Electron transfer flavoprotein, alpha subunit; Identified by sequence similarity; putative.
  
  0.859
ENN83943.1
Electron transfer flavoprotein subunit alpha; Identified by sequence similarity; putative.
  
  0.856
ENN83944.1
Electron transfer flavoprotein subunit beta; Identified by sequence similarity; putative.
  
  0.837
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.