Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENN84470.1Transcriptional regulator protein - nodulation competitiveness RosR; Identified by sequence similarity; putative. (150 aa)    
Predicted Functional Partners:
ENN87702.1
Protein of unknown function DUF1321; Identified by sequence similarity; putative.
  
     0.658
ENN85817.1
Hypothetical protein.
  
     0.635
ENN84469.1
Hypothetical protein.
 
     0.625
ENN87361.1
Hypothetical protein; Belongs to the UPF0335 family.
  
     0.555
ENN87769.1
Putative methyltransferase transcriptional regulator protein, ArsR family; Identified by sequence similarity; putative.
  
     0.522
ftsQ
Cell division protein Cellular Process; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.516
ENN84880.1
Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.515
ENN84338.1
Hypothetical protein.
  
     0.511
lptD
LPS-assembly protein lptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.501
ENN85874.1
Ubiquinol-cytochrome C chaperone; Identified by sequence similarity; putative.
  
     0.482
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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