STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN84814.1Pyridoxal-phosphate-dependent aminotransferase protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (408 aa)    
Predicted Functional Partners:
nifU
NifU-like protein; Identified by sequence similarity; putative.
  
 0.999
ENN84815.1
NifU-like N terminal domain-containing protein; Identified by sequence similarity; putative.
  
 0.999
nifQ
Nitrogen fixation protein NifQ; Identified by sequence similarity; putative.
 
 0.998
ENN89516.1
SirA family protein; Identified by sequence similarity; putative; Belongs to the sulfur carrier protein TusA family.
   
 0.987
fdxB
Ferredoxin; Identified by sequence similarity; putative.
 
 0.966
ENN88662.1
2Fe-2S ferredoxin; Identified by sequence similarity; putative.
 
 0.965
rkpA
Putative type I polyketide synthase RkpA; Identified by sequence similarity; putative.
   
 
 0.958
ENN85366.1
Phosophohydrolase; Identified by sequence similarity; putative.
  
 0.934
ENN89029.1
Ferredoxin oxidoreductase protein; Identified by sequence similarity; putative.
  
 0.924
ENN84720.1
Oxidoreductase FAD-binding protein domain protein; Identified by sequence similarity; putative.
  
 0.924
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.