STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galMPutative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (341 aa)    
Predicted Functional Partners:
ENN87470.1
Identified by sequence similarity; putative.
 
 
 0.801
ENN85052.1
Putative beta-galactosidase protein; Identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.783
ENN88332.1
XylR-type repressor; Identified by sequence similarity; putative.
 
  
 0.781
ENN88293.1
XylR-type repressor; Identified by sequence similarity; putative.
 
  
 0.779
cbbT
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.754
ENN88975.1
Putative KHG-KDPG bifunctional aldolase; Identified by sequence similarity; putative.
 
  
 0.744
ENN87530.1
Putative transcriptional regulator protein, ROK family; Identified by sequence similarity; putative.
 
  
 0.707
ENN83965.1
Glucose-6-phosphate isomerase protein; Identified by sequence similarity; putative; Belongs to the GPI family.
     
 0.706
ENN87424.1
Phosphoglucomutase protein; Identified by sequence similarity; putative.
   
 
 0.703
exoB
UDP-glucose 4-epimerase protein; Identified by sequence similarity; putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.695
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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