Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutIImidazolone-5-propionate hydrolase; Identified by sequence similarity; putative. (418 aa)    
Predicted Functional Partners:
hutU-2
Urocanase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.998
hutU
Urocanate hydratase; Identified by sequence similarity; putative.
 
 
 0.994
hutH-2
Histidine ammonia-lyase; Identified by sequence similarity; putative.
 
  
 0.990
atzA
Atrazine chlorohydrolase; Identified by sequence similarity; putative.
 
 
 0.986
hutH
Histidine ammonia-lyase; Identified by sequence similarity; putative.
 
  
 0.961
ENN89476.1
Phenylalanine/histidine ammonia-lyase; Identified by sequence similarity; putative.
 
  
 0.961
ENN86006.1
Putative histidine ammonia-lyase; Identified by sequence similarity; putative.
 
  
 0.956
ENN87408.1
N-formylglutamate amidohydrolase; Identified by sequence similarity; putative.
  
 
 0.944
ENN88264.1
Hypothetical protein.
  
 
 0.917
ENN84110.1
Histidine utilization repressor; Identified by sequence similarity; putative.
 
 
 0.907
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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