STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88523.1ABC lipoprotein transporter, ATP-binding protein component; Identified by sequence similarity; putative. (220 aa)    
Predicted Functional Partners:
ENN88525.1
ABC transporter integral membrane protein; Identified by sequence similarity; putative.
 
 0.994
ENN84936.1
Hypothetical protein.
  
 0.991
ENN85952.1
Putative ABC transporter permease protein; Identified by sequence similarity; putative.
  
 0.988
ENN86502.1
Putative transmembrane transporter component; Identified by sequence similarity; putative.
  
 0.974
ENN84880.1
Putative outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.961
ENN88524.1
ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
 
    
0.828
ENN88522.1
Lipoprotein; Identified by sequence similarity; putative.
       0.794
ENN89539.1
Putative ATP-dependent hydrolase protein; Identified by sequence similarity; putative; Belongs to the AAA ATPase family.
 
   
 0.716
ENN89819.1
Putative ATP-dependent hydrolase protein; Identified by sequence similarity; putative; Belongs to the AAA ATPase family.
 
   
 0.701
yecC
Amino acid ABC transporter, ATP-binding protein; Identified by sequence similarity; putative.
  
  
 
0.683
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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