STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thuATrehalosemaltose utilization protein; Identified by sequence similarity; putative. (261 aa)    
Predicted Functional Partners:
thuB
Myo-inositol 2-dehydrogenase protein; Identified by sequence similarity; putative.
 
     0.945
ENN85159.1
Hypothetical protein.
  
    0.774
ENN89221.1
Putative oxidoreductase protein; Identified by sequence similarity; putative.
 
     0.719
melA
Alpha-galactosidase; Identified by sequence similarity; putative.
  
     0.718
ENN89222.1
Putative xylose isomerase domain protein; Identified by sequence similarity; putative.
 
     0.717
ndvB
Protein ndvB; Identified by sequence similarity; putative.
   
    0.717
ENN85045.1
Identified by sequence similarity; putative.
  
     0.693
ENN84391.1
Putative oxidoreductase protein; Identified by sequence similarity; putative.
 
    0.637
ENN86752.1
Hypothetical protein.
  
     0.491
ENN89826.1
Small multidrug resistance protein; Identified by sequence similarity; putative.
       0.467
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.