STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN85774.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
ENN85564.1
Hypothetical protein.
 
     0.795
ENN85554.1
ParB domain protein nuclease; Identified by sequence similarity; putative.
 
     0.794
ENN85555.1
Hypothetical protein.
 
     0.794
ENN86599.1
Conjugal transfer protein TraF; Identified by sequence similarity; putative.
 
     0.774
ENN85562.1
Hypothetical protein.
  
     0.773
ENN85560.1
Hypothetical protein.
  
     0.771
ENN86587.1
Hypothetical protein.
  
     0.762
ENN86608.1
Conjugal transfer protein TrbF; Identified by sequence similarity; putative.
 
     0.750
ENN86605.1
Conjugal transfer protein TrbI; Identified by sequence similarity; putative.
 
     0.746
trbL
Putative conjugal transfer protein trbL; Identified by sequence similarity; putative.
 
     0.739
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.