STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88685.1ABC transporter, nucleotide binding protein/ATPase protein; Identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (548 aa)    
Predicted Functional Partners:
ENN88684.1
Dipeptide ABC transporter, dipeptide-binding protein; Identified by sequence similarity; putative.
  
  0.840
ENN88683.1
ABC transporter, membrane spanning protein dipeptide; Identified by sequence similarity; putative.
 
  
  0.839
ENN88686.1
Hypothetical protein.
 
     0.794
ENN88687.1
Hypothetical protein.
 
     0.786
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.747
atpA
ATP synthase alpha chain; Identified by sequence similarity; putative.
    
   0.735
ENN88688.1
Putative hemin-binding protein lipoprotein; Identified by sequence similarity; putative.
 
  
  0.712
atpG
ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.708
atpC
ATP synthase protein, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.695
ENN88682.1
Hypothetical protein.
 
     0.683
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.