STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN84078.1Glucosyll transferase, group 1; Identified by sequence similarity; putative. (393 aa)    
Predicted Functional Partners:
sqdD
Glucosylltransferase protein; Identified by sequence similarity; putative.
   
 0.935
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.879
cpsF
N-acetyl mannosamine transferase protein; Identified by sequence similarity; putative; Belongs to the glycosyltransferase 26 family.
 0.760
noeJ
Mannose-1-phosphate guanylyltransferase (GDP) protein; Identified by sequence similarity; putative; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.752
ENN85888.1
Putative glucosylltransferase protein; Identified by sequence similarity; putative.
 
 
 0.719
ENN84146.1
Acyl carrier protein; Identified by sequence similarity; putative.
  
 
   0.677
ENN88558.1
Hypothetical protein.
    
   0.668
ENN88418.1
Hypothetical protein.
    
   0.668
ENN84634.1
Amino acid adenylation; Identified by sequence similarity; putative; overlaps another CDS with the same product name.
  
 0.647
ENN88623.1
Putative UDP-galactopyranose mutase; Identified by sequence similarity; putative.
  
 
  0.625
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.