STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENN88634.11-pyrroline-4-hydroxy-2-carboxylate deaminase; Identified by sequence similarity; putative. (187 aa)    
Predicted Functional Partners:
dapB
Hypothetical protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
 0.790
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.787
ENN89806.1
2-oxoisovalerate dehydrogenase beta subunit protein; Identified by sequence similarity; putative.
   
 
 0.679
ENN88189.1
FAD linked oxidase domain protein; Identified by sequence similarity; putative.
  
 
  0.675
ENN86981.1
Hypothetical protein.
  
 
 0.659
ENN87509.1
Amidohydrolase 2; Identified by sequence similarity; putative.
  
  
 0.652
ENN87714.1
Bacterial glucose/galactose transporter; Identified by sequence similarity; putative.
  
  
 0.649
ttuB
Tartrate transporter; Identified by sequence similarity; putative.
  
    0.639
ENN87502.1
Hypothetical protein.
   
    0.631
ENN88814.1
Aldehyde dehydrogenase; Identified by sequence similarity; putative.
  
 
  0.628
Your Current Organism:
Rhizobium freirei
NCBI taxonomy Id: 363754
Other names: R. freirei PRF 81, Rhizobium freirei PRF 81, Rhizobium sp. PRF 81
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.