STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHD86249.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
KHD86583.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.907
KHD85289.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.899
KHD84950.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.841
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.658
KHD85402.1
Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
0.609
KHD86301.1
CitB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.589
KHD86269.1
acetyl-CoA carboxylase; Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.571
KHD86283.1
succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.533
KHD86265.1
succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.531
eutD
Phosphotransacetylase; In Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.530
Your Current Organism:
Bacillus ginsengihumi
NCBI taxonomy Id: 363870
Other names: B. ginsengihumi, Bacillus ginsengihumi Ten et al. 2007, DSM 18134, KCTC 13944, strain Gsoil 114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.