Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KHD84604.1 | KHD84766.1 | NG54_14455 | NG54_13435 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
| KHD84604.1 | KHD85624.1 | NG54_14455 | NG54_08180 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.796 |
| KHD84604.1 | rsbW | NG54_14455 | NG54_14450 | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.997 |
| KHD84766.1 | KHD84604.1 | NG54_13435 | NG54_14455 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.549 |
| KHD84766.1 | KHD84860.1 | NG54_13435 | NG54_12675 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| KHD84766.1 | KHD85624.1 | NG54_13435 | NG54_08180 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
| KHD84766.1 | rsbW | NG54_13435 | NG54_14450 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.465 |
| KHD84860.1 | KHD84766.1 | NG54_12675 | NG54_13435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.558 |
| KHD85624.1 | KHD84604.1 | NG54_08180 | NG54_14455 | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.796 |
| KHD85624.1 | KHD84766.1 | NG54_08180 | NG54_13435 | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
| KHD85624.1 | rsbW | NG54_08180 | NG54_14450 | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.894 |
| rsbW | KHD84604.1 | NG54_14450 | NG54_14455 | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
| rsbW | KHD84766.1 | NG54_14450 | NG54_13435 | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.465 |
| rsbW | KHD85624.1 | NG54_14450 | NG54_08180 | Serine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.894 |