Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EKO27_g9874PALP domain-containing protein. (320 aa)    
Predicted Functional Partners:
EKO27_g5821
Acetolactate synthase.
  
 0.970
EKO27_g3689
Tryptophan synthase.
  
 0.961
EKO27_g6505
ACT domain-containing protein.
  
 0.960
EKO27_g7784
Uncharacterized protein.
  
 
 0.954
EKO27_g2159
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 0.948
EKO27_g7319
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.933
EKO27_g1683
Beta_elim_lyase domain-containing protein.
   
 
 0.920
EKO27_g10931
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.891
EKO27_g3811
Uncharacterized protein.
  
 0.891
EKO27_g9744
Aminotran_5 domain-containing protein.
  
 
 0.872
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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