Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
EKO27_g9934Thioredoxin domain-containing protein. (232 aa)    
Predicted Functional Partners:
EKO27_g11051
Thioredoxin domain-containing protein.
  
 0.963
EKO27_g6055
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.903
EKO27_g2626
Nucleoside diphosphate kinase.
  
 0.875
EKO27_g3689
Tryptophan synthase.
    
 0.847
EKO27_g6141
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.821
EKO27_g5985
PMSR domain-containing protein.
   
 0.798
EKO27_g4639
Uncharacterized protein.
   
 0.798
EKO27_g7724
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.797
EKO27_g4408
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.797
EKO27_g5897
Cytochrome b5 heme-binding domain-containing protein.
    
 0.793
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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