STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKO27_g9739VWFA domain-containing protein. (745 aa)    
Predicted Functional Partners:
EKO27_g88
Uncharacterized protein.
   
 0.911
EKO27_g248
Response regulatory domain-containing protein.
    
 0.761
EKO27_g10521
Uncharacterized protein.
   
 0.720
EKO27_g10331
Uncharacterized protein.
    
 0.680
EKO27_g5814
Uncharacterized protein.
    
 0.680
EKO27_g11657
C2H2-type domain-containing protein.
   
  0.670
EKO27_g8043
Uncharacterized protein.
   
  0.670
EKO27_g4889
RING-type domain-containing protein.
   
  0.670
EKO27_g10877
ANK_REP_REGION domain-containing protein.
    
 0.668
EKO27_g11706
Uncharacterized protein.
    
 0.649
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.