STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKO27_g9551Methyltranfer_dom domain-containing protein. (328 aa)    
Predicted Functional Partners:
EKO27_g11871
Bms1-type G domain-containing protein.
   
  0.569
EKO27_g10415
Uncharacterized protein.
   
  0.569
EKO27_g8158
Uncharacterized protein.
   
  0.566
EKO27_g11474
Uncharacterized protein.
   
  0.563
EKO27_g3472
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.551
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.550
EKO27_g623
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.550
EKO27_g11531
Uncharacterized protein.
    
  0.548
EKO27_g1647
Uncharacterized protein.
   
 0.548
EKO27_g5200
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
  0.546
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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