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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKO27_g8604Uncharacterized protein; Belongs to the cytochrome P450 family. (532 aa)    
Predicted Functional Partners:
EKO27_g6055
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.800
EKO27_g3689
Tryptophan synthase.
    
 0.757
EKO27_g3234
HRDC domain-containing protein.
    
  0.596
EKO27_g1553
3'-5' exonuclease domain-containing protein.
    
  0.596
EKO27_g7407
PKS_KS domain-containing protein.
   
  0.595
EKO27_g2497
Uncharacterized protein.
   
  0.595
EKO27_g829
Carrier domain-containing protein.
   
  0.595
EKO27_g754
Carrier domain-containing protein.
   
  0.595
EKO27_g10201
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.574
EKO27_g3542
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.503
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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