STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKO27_g7286Aldo_ket_red domain-containing protein. (274 aa)    
Predicted Functional Partners:
EKO27_g3689
Tryptophan synthase.
    
  0.774
EKO27_g8383
Uncharacterized protein; Belongs to the FGGY kinase family.
   
 
 0.706
EKO27_g732
Uncharacterized protein.
    
 0.643
EKO27_g367
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 0.629
EKO27_g3554
S5A_REDUCTASE domain-containing protein.
   
 
 0.582
EKO27_g9413
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.559
EKO27_g9330
Aldo_ket_red domain-containing protein.
 
 
 
0.546
EKO27_g9642
Uncharacterized protein.
   
 
  0.540
EKO27_g8818
Hydrolase_4 domain-containing protein.
   
 
  0.540
EKO27_g7893
Uncharacterized protein.
   
 
 0.523
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.