STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKO27_g5753TMP-TENI domain-containing protein. (529 aa)    
Predicted Functional Partners:
EKO27_g4810
Uncharacterized protein.
 
 
 0.980
EKO27_g9379
Uncharacterized protein; Belongs to the histidine acid phosphatase family.
     
 0.811
EKO27_g7593
Uncharacterized protein.
   
 
 0.787
EKO27_g7577
LMWPc domain-containing protein.
    
  0.784
EKO27_g29
Uncharacterized protein.
   
 
 0.784
EKO27_g7266
Purple acid phosphatase.
     
 0.771
EKO27_g4322
Phosphodiesterase.
    
 0.716
EKO27_g8608
Uncharacterized protein.
    
 0.700
EKO27_g10502
Ubiquitin-like domain-containing protein.
    
  0.699
EKO27_g3518
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.684
Your Current Organism:
Xylaria grammica
NCBI taxonomy Id: 363999
Other names: X. grammica, Xylaria sp. 5091, Xylaria sp. 5129, Xylariaceae sp. 5129, Xylariaceae sp. 5151, Xylariaceae sp. 5228
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.