STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN70313.1Sulfur dehydrogenase subunit SoxC. (450 aa)    
Predicted Functional Partners:
SIN70328.1
Cytochrome c.
 
 
 0.998
SIN75295.1
Diheme cytochrome SoxA (sulfur oxidation).
 
 
 0.995
SIN75367.1
Monoheme cytochrome SoxX (sulfur oxidation).
 
 
 0.985
SIN75344.1
Thiosulfate-binding protein SoxY.
 
  
 0.979
SIN91137.1
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
  
 0.976
SIN75319.1
Sulfur compound chelating protein SoxZ.
 
  
 0.974
SIO08338.1
Protein of unknown function.
   
 0.949
SIN68337.1
NAD(P)H-flavin reductase.
   
 
 0.907
SIN69286.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
 0.879
SIN91464.1
Hypothetical protein.
    
 0.879
Your Current Organism:
Sulfurivirga caldicuralii
NCBI taxonomy Id: 364032
Other names: DSM 17737, JCM 13439, S. caldicuralii, Sulfurivirga caldicuralii Takai et al. 2006, strain MM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.