STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN78643.1Uncharacterized conserved protein. (819 aa)    
Predicted Functional Partners:
SIO12238.1
Protein of unknown function.
  
     0.763
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.744
SIO08767.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.712
SIN70794.1
DNA polymerase-3 subunit epsilon.
  
     0.663
SIN78236.1
Hypothetical protein.
  
     0.652
SIN78456.1
Flagellar hook-associated protein 3 FlgL.
 
 
 0.643
SIO20109.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.624
SIN78519.1
Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.622
SIN96622.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.622
SIO15126.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
     
 0.592
Your Current Organism:
Sulfurivirga caldicuralii
NCBI taxonomy Id: 364032
Other names: DSM 17737, JCM 13439, S. caldicuralii, Sulfurivirga caldicuralii Takai et al. 2006, strain MM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.