STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN89356.1Hypothetical protein. (352 aa)    
Predicted Functional Partners:
SIN89384.1
Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family.
       0.785
SIN89407.1
Peroxiredoxin.
  
    0.774
SIN89433.1
Thioredoxin-related protein.
       0.773
SIN89461.1
Outer membrane protein TolC.
       0.773
SIN89484.1
Biotin-lipoyl like.
       0.773
SIN89509.1
Hypothetical protein.
       0.773
SIN89536.1
Ankyrin repeat-containing protein.
       0.773
purN
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.584
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
       0.584
dcd
dCTP deaminase; Catalyzes the deamination of dCTP to dUTP.
       0.543
Your Current Organism:
Sulfurivirga caldicuralii
NCBI taxonomy Id: 364032
Other names: DSM 17737, JCM 13439, S. caldicuralii, Sulfurivirga caldicuralii Takai et al. 2006, strain MM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.