STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN96454.1PAS/PAC sensor signal transduction histidine kinase. (386 aa)    
Predicted Functional Partners:
SIN96426.1
Two-component system, response regulator FlrC.
 
  0.991
SIO08767.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.944
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.927
SIN96369.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.908
SIN96483.1
Sigma-54 specific transcriptional regulator, flagellar regulatory protein A.
 
  0.862
SIN78217.1
Two-component system, chemotaxis family, response regulator CheV.
 
 
 0.858
SIO11703.1
Two-component system, chemotaxis family, response regulator CheV.
 
 
 0.848
SIN95797.1
Two-component system, chemotaxis family, response regulator CheY.
 
 
 0.828
SIN95888.1
Flagellar biosynthesis protein FlhF.
 
  
 0.818
SIO05740.1
Two component transcriptional regulator, winged helix family.
 
 
 0.794
Your Current Organism:
Sulfurivirga caldicuralii
NCBI taxonomy Id: 364032
Other names: DSM 17737, JCM 13439, S. caldicuralii, Sulfurivirga caldicuralii Takai et al. 2006, strain MM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.