STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCM_004471Endoplasmic reticulum auxin binding protein 1 isoform 1. (216 aa)    
Predicted Functional Partners:
TCM_020205
Leucine-rich repeat protein kinase family protein isoform 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.881
TCM_011255
Leucine-rich repeat protein kinase family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.868
TCM_017539
Transmembrane kinase 1 isoform 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.868
TCM_022928
Leucine-rich repeat protein kinase family protein isoform 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.800
TCM_041268
Leucine-rich repeat protein kinase family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
     
  0.800
TCM_010762
DNA-binding storekeeper protein-related.
  
     0.535
TCM_017091
DNA-binding storekeeper protein-related.
  
     0.515
TCM_040713
Translocation protein-related.
      
 0.513
TCM_024823
Integrase-type DNA-binding superfamily protein.
      
 0.510
TCM_028329
Uncharacterized protein.
      
 0.510
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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