STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCM_020014Leucine-rich repeat (LRR) family protein, putative. (277 aa)    
Predicted Functional Partners:
TCM_032042
Leucine-rich repeat transmembrane protein kinase, putative.
  
 
  0.509
TCM_046351
EF-TU receptor.
  
     0.488
TCM_032009
Receptor like protein 34, putative.
  
     0.481
TCM_027298
Serine/threonine-protein kinase bri1, putative.
  
     0.480
TCM_030701
Receptor like protein 33.
  
     0.466
TCM_016107
Uncharacterized protein.
      
 0.465
TCM_000847
Receptor like protein 44 isoform 1.
  
     0.459
TCM_032031
Receptor like protein 27.
  
     0.459
TCM_046201
Uncharacterized protein.
  
     0.457
TCM_021720
EF-TU receptor, putative.
  
     0.448
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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